[BioC] BSgenome package - danRer7 genome assembly

[Hervé Pagès]

Hi Brett,

On 11-06-08 09:31 AM, Brett Maricque wrote:
> Dear Herve,
>
> Can the danRer7 genome assembly be added to the BSgenome package for
> Bioconductor?

The danRer7 genome is already in Bioconductor. Try this (from
R-2.13 or R-2.14):

   library(BSgenome)
   available.genomes()

and you should see it. Then install it with biocLite() (it might
take a while, it's 400+ MB).

Please let us know if you run into problems.

Thanks,
H.

>
> Thank you in advance,
>
> Brett Maricque
>
>
> Brett Maricque
> Washington University in St. Louis
> PhD Candidate, Lab of Dr. Ting Wang
> Program in Computational and Systems Biology
>


-- 
Hervé Pagès

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