[BioC] which illumina annotation package I should use for Illumina Mouse Ref 8 v 1.1 expression beadchip

[Wong, Chao-Jen]

Dear list,

I am not sure which illumina annotatin package I should use for Illumina Mouse Ref 8 v 1.1 expression beadchip. Is illuminaMousev2.db (GW6 v2) appropriate? At first I thought illuminatMouse GW6 format version 1 (illuminaMousev1.db) would include Mouse Ref-8 v1.1 probe annotation, but the identifiers (GI_xxxx) are different from the probe_ID of Mouse Ref-8 v1.1 (ILMN_xxxx). 

Thanks,
Chao-Jen

-- 
Chao-Jen Wong 
Program in Computational Biology 
Division of Public Health Sciences 
Fred Hutchinson Cancer Research Center 
1100 Fairview Avenue N., M1-B514 
PO Box 19024 
Seattle, WA 98109 
206.667.4485 
cwon2 at fhcrc.org