[BioC] RMA median Polish in Oligo package

[Benilton Carvalho]

WIth oligo, you can run only (rma) background correction and/or
(quantile) normalization using the following:

pms = pm(yourObject)
bg = backgroundCorrect(pms)
norm = normalize(bg)

b

On 25 November 2010 10:05, Michael MOZAR <mozemaster at gmail.com> wrote:
> Hi,
> i'm using the oligo package to analyse my microrray data (nimblegen oligo
> array)
> but i've got a problem with the summarization with median polish
> i want to know if there is a way to desactivate the median polish ?
> or another package to do the same stuff that rma do ?
> Thanks
>
> --
> MOZAR Michaël
> Master Bioinformatique
> Université de Nantes
> 0688715937
>
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