[BioC] affyQCReport with drosgenome2cdf

[Assa Yeroslaviz]

Hi everybody,

I have a set of drosophile genome 2.0 arrays to analyze. I wanted to
start with a quality control using the affyQCReport package.

according to the manual I set the enivironment.
> setQCEnvironment("drosgenome2cdf", "/home/AYeroslaviz/R/x86_64-pc-linux-gnu-library/2.12/simpleaffy/extdata")

and run the QCreport on the raw data
> QCReport(rawData)

unfortunately I get an error message

Error: NAs in foreign function call (arg 5)

Can someone please tell me what the meaning of this error. I tried to
search the mailing lists but didn't find anything.
If AffyQCReport doesn't work, do I have an alternative?

Thanks

Assa

> sessionInfo()
R version 2.12.0 (2010-10-15)
Platform: x86_64-pc-linux-gnu (64-bit)

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C
 [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8
 [5] LC_MONETARY=C              LC_MESSAGES=en_US.UTF-8
 [7] LC_PAPER=en_US.UTF-8       LC_NAME=C
 [9] LC_ADDRESS=C               LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
 [1] tools     tcltk     splines   stats     graphics  grDevices utils
 [8] datasets  methods   base

other attached packages:
 [1] simpleaffy_2.26.0         genefilter_1.32.0
 [3] drosophila2cdf_2.7.0      arrayQualityMetrics_3.2.1
 [5] vsn_3.18.0                affyPLM_1.26.0
 [7] gcrma_2.22.0              tkWidgets_1.28.0
 [9] widgetTools_1.28.0        siggenes_1.24.0
[11] multtest_2.6.0            samr_1.28
[13] impute_1.24.0             MASS_7.3-5
[15] vioplot_0.2               sm_2.2-4.1
[17] preprocessCore_1.10.0     DynDoc_1.28.0
[19] cluster_1.13.1            affydata_1.11.10
[21] affycomp_1.26.0           affyQCReport_1.28.0
[23] lattice_0.19-13           affy_1.28.0
[25] Biobase_2.10.0

loaded via a namespace (and not attached):
 [1] affyio_1.16.0        annotate_1.28.0      AnnotationDbi_1.12.0
 [4] beadarray_2.0.2      Biostrings_2.18.0    DBI_0.2-5
 [7] grid_2.12.0          hwriter_1.2          IRanges_1.8.2
[10] latticeExtra_0.6-14  limma_3.6.6          marray_1.28.0
[13] RColorBrewer_1.0-2   RSQLite_0.9-1        stats4_2.12.0
[16] survival_2.35-8      SVGAnnotation_0.7-2  XML_2.6-0
[19] xtable_1.5-6