[BioC] Best way to get updated annotation for BACs

[Daniel Brewer]

Hello,

I am dealing with a BACs microarray, but the annotation I have is from
an old version of the human genome.  Could anyone suggest some ways of
updating the information to hg19?  I would initially like the positional
information, but also want gene(s) the BAC covers and whether the BAC
covers the whole gene or whether it is at the front or back.  For each
BAC I have a clone name e.g. RP11-172L12 and a ChoriID N0172L12.

Many thanks

Dan

-- 
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Daniel Brewer, Ph.D.

Institute of Cancer Research
Molecular Carcinogenesis
Email: daniel.brewer at icr.ac.uk
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The Institute of Cancer Research: Royal Cancer Hospital, a charitable Company Limited by Guarantee, Registered in England under Company No. 534147 with its Registered Office at 123 Old Brompton Road, London SW7 3RP.

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