[BioC] makeAttr() missing in KEGGgraph

Groot, Philip de philip.degroot at wur.nl
Wed May 26 14:06:17 CEST 2010


Hello,

The KEGGgraph vignette depicts an example in which the command "makeAttr" is regularly used. However, this command is simply not available! Not in KEGGgraph and a search does not provide anything. So my question is: does somebody know how I am supposed to access the makeAttr function?

> sessionInfo()
R version 2.11.0 (2010-04-22)
x86_64-unknown-linux-gnu
locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C
 [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8
 [5] LC_MONETARY=C              LC_MESSAGES=en_US.UTF-8
 [7] LC_PAPER=en_US.UTF-8       LC_NAME=C
 [9] LC_ADDRESS=C               LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] grid      stats     graphics  grDevices utils     datasets  methods
[8] base
other attached packages:
[1] org.Hs.eg.db_2.4.1   RSQLite_0.8-4        DBI_0.2-5
[4] AnnotationDbi_1.10.0 Biobase_2.8.0        KEGGgraph_1.4.0
[7] Rgraphviz_1.26.0     graph_1.26.0         XML_2.8-1
loaded via a namespace (and not attached):
[1] tools_2.11.0

Regards,

Dr. Philip de Groot Ph.D.
Bioinformatics Researcher

Wageningen University / TIFN
Nutrigenomics Consortium
Nutrition, Metabolism & Genomics Group
Division of Human Nutrition
PO Box 8129, 6700 EV Wageningen
Visiting Address: Erfelijkheidsleer: De Valk, Building 304
Dreijenweg 2, 6703 HA  Wageningen
Room: 0052a
T: +31-317-485786
F: +31-317-483342
E-mail:   Philip.deGroot at wur.nl<mailto:Philip.deGroot at wur.nl>
Internet: http://www.nutrigenomicsconsortium.nl<http://www.nutrigenomicsconsortium.nl/>
             http://humannutrition.wur.nl/
             https://madmax.bioinformatics.nl/



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