[BioC] Problem with createAnnObjs.HUMANCHIP_DB
Wendelin Waunzel
waunzel at web.de
Tue May 25 13:45:04 CEST 2010
Hello,
Being keen on the RmiR package I tried to install the corresponding data set
(hgug4112a.db_2.2.5), but failed with the following error code. I did a
complete update of my R/Bioconductor environment as recommended in other
postings, but this step didn't solve my problems. I have a fresh 2.11.0.
All necessary packages were installed in advance:
DBI_0.2-5.tar.gz
RSQLite_0.9-0.tar.gz
AnnotationDbi_1.10.1.tar.gz
hgug4112a.db_2.2.5.tar.gz
RSVGTipsDevice_1.0-1.tar.gz
RmiR.Hs.miRNA_1.0.6.tar.gz
RmiR_1.4.0.tar.gz
hgug4112a.db_2.2.5.tar.gz
Here is the R complaint
#######################
* installing *source* package 'hgug4112a.db' ...
** R
** inst
** preparing package for lazy loading
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
Error : .onLoad failed in loadNamespace() for 'hgug4112a.db', details:
call: fun(...)
error: could not find function "createAnnObjs.HUMANCHIP_DB"
ERROR: loading failed
* removing '/usr/bin/R-2.11.0/library/hgug4112a.db'
#####################################
What's the problem and how can I solve it?
Thank you for any suggestions
W
NEU: WEB.DE DSL für 19,99 EUR/mtl. und ohne Mindest-Laufzeit!
http://produkte.web.de/go/02/
More information about the Bioconductor
mailing list