[BioC] Human, Mouse and Rat homologs
David Lyon
david_lyon3 at yahoo.com
Thu May 20 23:08:49 CEST 2010
Hi Michael and Wolfgang
Thanks for your help, I think I can get what I need.I am new to R and therefore apologizes for the simple q's.
A couple last questions on this thread if I may:
if I wanted all the gene ids from ensembl it would be this:
entrez =getBM("ensembl_gene_id", mart=human)
> entrez
but how can I get the following working and return all the gene_ids and transcript_ids?
entrez =getBM("ensembl_gene_id","ensembl_transcript_id", mart=human)
My final question is there a wild card '*' , essentially give me all the attributes returns for human ensembl eg:
entrez =getBM(*, mart=human)
Thanks again!
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