[BioC] Mapping NCBI accession numbers to GO terms

[January Weiner]

Hello,

I'm not sure how to retrieve GO terms associated with the NCBI
accession numbers (such as "NM_172496").

I have found references to GOLOCUSID, but I cannot find this
environment. I have GOstats and I can access GOTERM, but not
GOLOCUSID.

Anyways, I also failed to map NCBI accession numbers to Entrez IDs
using BioIDMapper:

library(BioIDMapper)
data(glist)
> head( bio.convert( glist, 1, 24 ) )
Parsing data from UniProt
200  IDs have been processed
159  IDs have been processed
Parsing data from UniProt
22  IDs have been processed
 No ID found in database. 0 IDs have been processed
Done...
  P_GI       ACC        P_ENTREZGENEID
1 "54125119" "A6YK35\r" NA
2 "54125311" "A6YK35\r" NA
3 "54125051" "A6YK35\r" NA
4 "54125369" "A6YK35\r" NA
5 "54125435" "A7J4K5\r" NA
6 "54125083" "A6YK35\r" NA
>

Best regards,

confused January

-- 
-------- Dr. January Weiner 3 --------------------------------------
Max Planck Institute for Infection Biology
Charitéplatz 1
D-10117 Berlin, Germany
Web   : www.mpiib-berlin.mpg.de
Tel     : +49-30-28460514