[BioC] package ‘hugene11sttranscriptcluster.db’ is not available

[David Lyon]

Thanks for your help Martin

sessioninfo as below:


> sessionInfo()
R version 2.10.1 (2009-12-14) 
i486-pc-linux-gnu 

locale:
 [1] LC_CTYPE=en_US.utf8       LC_NUMERIC=C             
 [3] LC_TIME=en_US.utf8        LC_COLLATE=en_US.utf8    
 [5] LC_MONETARY=C             LC_MESSAGES=en_US.utf8   
 [7] LC_PAPER=en_US.utf8       LC_NAME=C                
 [9] LC_ADDRESS=C              LC_TELEPHONE=C           
[11] LC_MEASUREMENT=en_US.utf8 LC_IDENTIFICATION=C      

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

loaded via a namespace (and not attached):
[1] tools_2.10.1






----- Original Message ----
From: Martin Morgan <mtmorgan at fhcrc.org>
To: David Lyon <david_lyon3 at yahoo.com>
Cc: bioconductor at stat.math.ethz.ch
Sent: Tue, May 18, 2010 10:22:22 PM
Subject: Re: [BioC] package ‘hugene11sttranscriptcluster.db’ is not available

On 05/18/2010 06:15 PM, David Lyon wrote:
> I can download and install 
> * DONE (hugene10sttranscriptcluster.db)
> 
> but have problems with hugene11sttranscriptcluster.db:
>   package ‘hugene11sttranscriptcluster.db’ is not available
> 
> Does anyone else have this problem or is there something silly that I am doing?

Hi David --

    source("http://bioconductor.org/biocLite.R")
    biocLite("hugene11sttranscriptcluster.db")

Works for me.

What is your sessionInfo() ?

What does 'download and install' mean to you?

Martin

> sessionInfo()
R version 2.11.0 Patched (2010-05-01 r51886)
x86_64-unknown-linux-gnu

locale:
[1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=C              LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8       LC_NAME=C
[9] LC_ADDRESS=C               LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base

loaded via a namespace (and not attached):
[1] tools_2.11.0

> 
> thanks
> 
> 
> 
> 
> 
> _______________________________________________
> Bioconductor mailing list
> Bioconductor at stat.math.ethz.ch
> https://stat.ethz.ch/mailman/listinfo/bioconductor
> Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor


-- 
Martin Morgan
Computational Biology / Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N.
PO Box 19024 Seattle, WA 98109

Location: Arnold Building M1 B861
Phone: (206) 667-2793