[BioC] Help with PlateCore

[Sancho, Jose]

I did that later on, and it worked. 

Thanks

-----Original Message-----
From: Martin Morgan [mailto:mtmorgan at fhcrc.org] 
Sent: Tuesday, May 18, 2010 4:12 PM
To: Sancho, Jose
Cc: bioconductor at stat.math.ethz.ch
Subject: Re: [BioC] Help with PlateCore

On 05/18/2010 10:55 AM, Sancho, Jose wrote:
> I am getting the error message (below in red) when I try to plot using
> plateCore. I created a flowPlate (cprFP) and a flowSet, Following, the
> vignette I have created a rectGate and normGate, but I can't plot
> anything. I get the same error message using the files used on the
> vignette.
> 
>  
> 
> xyplot(`SSC-H` ~ `FSC-H` / as.factor(Well.Id), cprFP[1:2],
> displayFilter=TRUE + smooth=FALSE,
col=c("red","blue"),filter=rectGate)
> 
>  
> 
> I tried also xyplot(`SSC-H` ~ `FSC-H` | as.factor(Well.Id),
cprFP[1:2],
> displayFilter=TRUE + smooth=FALSE,
col=c("red","blue"),filter=rectGate)
> 
>  
> 
> In both cases I get the same message:
> 
>  
> 
>  
> 
> Error: unexpected symbol in:
> 
> "xyplot(`SSC-H` ~ `FSC-H` / as.factor(Well.Id), cprFP[1:2],
> displayFilter=TRUE
> 
> smooth"

I think you're aiming for displayFilter=TRUE, smooth=FALSE, i.e., remove
the '+' and add a ','.

Martin


> 
>  
> 
>  
> 
> Jose Sancho
> 
>  
> 
>  
> 
> 
> 	[[alternative HTML version deleted]]
> 
> _______________________________________________
> Bioconductor mailing list
> Bioconductor at stat.math.ethz.ch
> https://stat.ethz.ch/mailman/listinfo/bioconductor
> Search the archives:
http://news.gmane.org/gmane.science.biology.informatics.conductor


-- 
Martin Morgan
Computational Biology / Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N.
PO Box 19024 Seattle, WA 98109

Location: Arnold Building M1 B861
Phone: (206) 667-2793