[BioC] annaffy-like HTML autput for org.Hs.eg.db and similar metadata packages

[Claudio Lottaz]

Dear all,

I lately used annaffy on a regular basis to generate HTML-output for  gene lists from Affymetrix microarray analysis. I now also need similar output from annotation data taken from org.Hs.eg.db and similar packages. Unfortunately, annaffy has difficulties to cope at least with GO and cytobands as far as I can see. Does anybody happen to know some workarounds here?

Thanks for any help!
Cheers,
Claudio



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Claudio Lottaz
Computational Diagnostics, Institute for Functional Genomics
University of Regensburg, D-93053 Regensburg (Germany)
phone: +49 941 943 1584, fax: +49 941 5020