[BioC] calculating heterozygosity, and genetic diversity

Coghlan, Avril A.Coghlan at ucc.ie
Thu Mar 18 13:55:26 CET 2010

Dear all,

I am wondering is it possible to calculate allele frequencies, observed
heterozygosity, expected Heterozygosity, and genetic diversity (Nei's
genetic diversity) using Bioconductor?
I have a set of microsatellite genotype data for a large number of
microsatellite loci for diploid individuals from two different
I will appreciate any advice a lot.


Avril Coghlan
University College Cork

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