[BioC] AgiMicroRna package is not available at bioconductor or not in active form???

Sean Davis seandavi at gmail.com
Tue Mar 16 11:36:01 CET 2010


On Tue, Mar 16, 2010 at 6:24 AM, neeraj rana <kushrn at gmail.com> wrote:
> hi,
>
> i need to analyse Agilent microrna microarray by the package AgiMicroRna ,i
> tried it to intstall but the msz  came
>
>> source("http://bioconductor.org/biocLite.R")
> Warning messages:
> 1: In safeSource() : Redefining ‘biocinstall’
> 2: In safeSource() : Redefining ‘biocinstallPkgGroups’
> 3: In safeSource() : Redefining ‘biocinstallRepos’
>>     biocLite("AgiMicroRna")
> Using R version 2.9.2, biocinstall version 2.4.13.
> Installing Bioconductor version 2.4 packages:
> [1] "AgiMicroRna"
> Please wait...
>
> Warning message:
> In getDependencies(pkgs, dependencies, available, lib) :
>  package ‘AgiMicroRna’ is not available
>
> Please let me know whethr it is available or not,or any alternative ??

Hi, Neeraj.

AgiMicroRna became available only in Bioconductor 2.5, which
corresponds to R-2.10.  You will need to upgrade your R to the newest
version in order to use AgiMicroRna.

Sean



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