[BioC] Normalization of expression values

dorothyc dorothyc at bcgsc.ca
Wed Jul 28 20:02:34 CEST 2010


Thanks so much, Steve!  It works now.

Dorothy

On 2010-07-28, at 9:44 AM, Steve Lianoglou wrote:

> By the way ..
> 
> On Tue, Jul 27, 2010 at 7:19 PM, dorothyc <dorothyc at bcgsc.ca> wrote:
> 
>> I came across normalize.quantiles {affy} but got the following errors:
>> ------
>>> library(affy)
>>> normalize.quantiles(intensity.M,copy=TRUE)
>> Error: could not find function "normalize.quantiles"
>> ------
> 
> normalize.quantiles is in the preprocessCore library:
> 
> R> library(preprocessCore)
> R> normalize.quantiles(...)
> 
> -- 
> Steve Lianoglou
> Graduate Student: Computational Systems Biology
>  | Memorial Sloan-Kettering Cancer Center
>  | Weill Medical College of Cornell University
> Contact Info: http://cbio.mskcc.org/~lianos/contact



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