[BioC] Problem for install DESeq

[Vincent Carey]

please upgrade to R 2.11 -- i don't think DESeq was available for 2.10

On Fri, Jul 23, 2010 at 6:13 PM, Jinyan Huang <jhuang.ceph at gmail.com> wrote:
> When I try to install DESeq. I got these errors.
> For differential expression analysis, have you compare with cuffdiff
> tools? Thanks.
>
>> source("http://www.bioconductor.org/biocLite.R")
>> biocLite("DESeq")
> Using R version 2.10.1, biocinstall version 2.5.11.
> Installing Bioconductor version 2.5 packages:
> [1] "DESeq"
> Please wait...
>
> Warning message:
> In getDependencies(pkgs, dependencies, available, lib) :
>  package ‘DESeq’ is not available
>> sessionInfo()
> R version 2.10.1 (2009-12-14)
> i386-apple-darwin10.2.0
>
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/C/C/en_US.UTF-8/C
>
> attached base packages:
> [1] stats     graphics  grDevices utils     datasets  methods   base
>
> loaded via a namespace (and not attached):
> [1] tools_2.10.1
>
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