[BioC] Patch for sortBam functionality in Rsamtools
Martin Morgan
mtmorgan at fhcrc.org
Fri Jul 23 13:06:01 CEST 2010
Thomas Unterthiner <thomas.unterthiner at students.jku.at> writes:
> Hi there!
> Attached to this mail you'll find a patch that adds a "sortBam"
> function to Rsamtools, which provides the functionality of to the
> "samtools sort" tool.
>
> The patch was made using R-devel version 2.12.0 (2010-07-21 r52595)
> against the Bioconductor SVN trunk rev. 48321 (checked out
> 2010-07-22). I'd appreciate it if the patch could be integrated into
> the next Rsamtools release (provided it meets the necessary quality
> criteria, that is ;) ). Also, any criticism of any kind is welcome as
> well. :)
Hi Thomas -- attachments get stripped from the mailing list; feel free
to forward to me directly. Looking forward to your contribution! Martin
> Cheers
>
> Thomas
>
>
>
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Martin Morgan
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