[BioC] SNP chip
Adrian Johnson
oriolebaltimore at gmail.com
Thu Jul 8 18:59:42 CEST 2010
Hi:
I have a snp array 6 (affymetrix) data table that looks like the following:
SNPID Call
SNP_A-8373748 BB
SNP_A-2210818 AB
SNP_A-4290346 BB
SNP_A-2219708 AA
I want to be able to convert this data into a .BED file like format
that will look like following:
Chromosome Position Reference Base Call
chr19 2094894 A T
chr19 2095300 G A
Is it possible through bioconductor? Thanks for your time.
-Adrian
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