[BioC] list of annaffy .db files?

[Vincent Carey]

there are no annaffy .db files -- the .db annotation paradigm is
independent of annaffy

see the annotationDbi vignette for more background

for the ST array you can probably work from the package at

http://www.bioconductor.org/packages/release/data/annotation/html/hugene10sttranscriptcluster.db.html

but there is also a probeset version

On Tue, Aug 31, 2010 at 10:46 AM, Andrew Einhorn
<andreweinhorn at gmail.com> wrote:
> I am trying to use annaffy to annotate a hugene10stv1 array.  I cannot find
> the name of the .db annotation packages I am supposed to install.  My code
> thus far looks like:
>
> anncols <- aaf.handler()[c(1:4, 6,11)]
> anntable <- aafTableAnn(rownames(exprs(results))[1:50], "insert package
> name", anncols)
>
> Is there a list somewhere of the names of all the annaffy .db files?
>
> Regards
>
> Andrew
>
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>
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