[BioC] mypeaklist in ChIPpeakAnno

[Zhu, Julie]

Dear Ramu,

It is a RangedData. Please take a look at the 2nd example given in the
Bioc2010 meeting in Seattle.
http://www.bioconductor.org/help/course-materials/2010/BioC2010/BioC2010_ChI
PpeakAnno.pdf

You can also get more information in a R session with the following
functions.
library(ChIPpeakAnno)
?annotatePeakInBatch
browseVignettes("ChIPpeakAnno")

Kind regards,

Julie


*******************************************
Lihua Julie Zhu, Ph.D
Research Associate Professor
Program in Gene Function and Expression
Program in Molecular Medicine
University of Massachusetts Medical School
364 Plantation Street, Room 613
Worcester, MA 01605
508-856-5256
http://www.umassmed.edu/pgfe/faculty/zhu.cfm



On 8/12/10 6:22 AM, "Ramu Chenna" <ramu.chenna at biotec.tu-dresden.de> wrote:

> Hello Julie Zhu,
> 
> A quick question regarding your chipseq paper in BMC bioinformatics
> (2010). 
> Could you just show me the sample of mypeaklist (should it be in bed
> format or...)
> 
> Thanks
> Ramu