[BioC] Human Affymetrix Exon microarrays

Tim Yates tyates at picr.man.ac.uk
Tue Aug 3 09:23:39 CEST 2010


Exonmap has been deprecated in favour of xmapcore

http://www.bioconductor.org/packages/release/bioc/html/xmapcore.html

It still requires a MySQL database be installed locally, but no longer
requires you to install the Ensembl database as well

Tim


On 02/08/2010 22:04, "Bhatti, Gaurav" <gbhatti at med.wayne.edu> wrote:

> Hey
> Try exonmap. It involves installation of MySQL. If you don't want to do that
> then try aroma.affymetrix. They have a very comprehensive website
> http://www.aroma-project.org/
> 
> Gaurav Bhatti
> 
> -----Original Message-----
> From: bioconductor-bounces at stat.math.ethz.ch
> [mailto:bioconductor-bounces at stat.math.ethz.ch] On Behalf Of Jinyan Huang
> Sent: Monday, August 02, 2010 4:44 PM
> To: Bioconductor mailing list
> Subject: [BioC] Human Affymetrix Exon microarrays
> 
> Hi all,
> 
> Do you have some packages recommend for Human Affymetrix Exon 1.0 st
> microarrays?
> 
> Thanks.
> 
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