[BioC] How to handle data from solid SOLiD

[Martin Morgan]

Sunny Srivastava wrote:
> Dear Bioconductor Helpers,
> I have used Bioconductor for microarray data analysis.
> 
> Can any one pls tell me if there are ways to handle data from SOLiD?

Hi Sunny -- The software currently available in Bioconductor does not
handle SOLiD colorspace. Perhaps others in the Bioconductor community
are working on this? There is a rich collection of Bioconductor software
for handling sequence data in nucleotide space.

Martin

> 
> I have googled and found that a few packages mention support for SOLiD but
> most of the examples are directed towards Solexa.
> 
> Any help is greatly appreciated!
> 
> Thanks,
> S.
> 
> 	[[alternative HTML version deleted]]
> 
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-- 
Martin Morgan
Computational Biology / Fred Hutchinson Cancer Research Center
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