[BioC] Ensembl mart release 55: Useful information
rhoda at ebi.ac.uk
rhoda at ebi.ac.uk
Wed Jul 15 11:13:11 CEST 2009
Hi,
The new Ensembl marts for release 55 are now live on www.ensembl.org and
www.biomart.org. The following improvements and modifications have been
made:
Mart Builds (all species)
Ensembl mart 55
* Addition of new species Macropus eugenii (Wallaby)
* Updated the assembly for Homo sapiens (GRCh37)
* C. elegans now on release 200
* Addition of probe and array information from the Functional Genomics
database
* Re-introduction of Gene Ontology filter section. The Ensembl mart
now uses the new ensembl_ontology database instead of the ensembl_go
database.
* Addition of constitutive exon information
* Contains new mapping for Danio rerio coreexpression ESTs
Vega mart 36
* Addition of constitutive exon information
Ensembl variation mart 55
New variation source filters and attributes:
* Illumina CytoSNP 12 v1
* Illumina Human 1M duo V3
* Illumina Human 660W quad
NEW Ensembl Functional Genomics mart 55
Contains feature set, external feature, annotated feature and regulatory
feature information from the Ensembl functional genomics database.
Regards,
Rhoda
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