[BioC] problem detected during utilization of LimmaGUI

Keith Satterley keith at wehi.EDU.AU
Thu Dec 10 07:36:01 CET 2009


Dear Susanna,

I don't know how you conclude that flagged spots are not being 
eliminated. Exactly what have you seen that leads you to this 
conclusion. What do you expect to see?

cheers,

Keith

========================
Keith Satterley
Bioinformatics Division
The Walter and Eliza Hall Institute of Medical Research
Parkville, Melbourne,
Victoria, Australia
email:keith at wehi.edu.au
=======================



Susana Gomes wrote:
> God morning,
>
>  
>
> I´m using limmaGUI to analyse microarray data extracted as quantarray files.
>
> My problem is, that during the analysis I have note that the flagged spots
> are not being eliminated despite I have selected the function “Spot Quality
> Weighting” as “wtIgnore.Filter”.
>
>  
>
> I will be waiting for some help (make note that I do not know anything about
> programming language :-))
>
>  
>
> Thanks for the attention
>
> Susana
>
>
> 	[[alternative HTML version deleted]]
>
>   
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