[BioC] book: Bioinformatics and Computational Biology Solutions ...
Robert Gentleman
rgentlem at fhcrc.org
Tue Sep 30 19:52:53 CEST 2008
Hi Ian,
We will need to fix that, and I suspect that it and other changes in
packages since that book was written will make some of the code less
useful. We are now planning a new edition, but probably that is year or
so off.
In the meantime, please feel free to ask direct questions, and I will
see how much of the book we can renovate to use the more recent
approaches. However, there are two other options you might consider:
from an applications point of view, the Bioconductor Case Studies
book, is more up to date and provides a reasonable coverage
some details are here:
http://www.bioconductor.org/pub/biocases/
and from a programming perspective:
http://www.bioconductor.org/pub/RBioinf/
provides a deeper look at the tools that underly most of the software
packages,
best wishes
Robert
A.I. McLeod wrote:
> After running,
> getMonograph()
>
> I get the warning:
>
> Warning message:
> package ‘arrayMagic’ is not available
>
> I see this package is not longer available with Bioconductor 2.2 Software
> Packages.
>
> I don't know if this is critical or not?
>
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--
Robert Gentleman, PhD
Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N, M2-B876
PO Box 19024
Seattle, Washington 98109-1024
206-667-7700
rgentlem at fhcrc.org
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