[BioC] mas5calls p-values
James W. MacDonald
jmacdon at med.umich.edu
Thu Sep 11 19:14:39 CEST 2008
Hi Salih,
The p-values are stored in the se.exprs part of the assayData slot of
the ExpressionSet. You access these things using the assayDataElement()
accessor, so you can get them thusly (assuming your ExpressionSet is
called exprs):
pvalues <- assayDataElement(exprs, "se.exprs")
Best,
Jim
Salih Tuna wrote:
> Hi,
> i am new to R and Bioconductor. i am trying to use the mas5calls and want
> to view the p-values. I can only see the restuls as P/A.
> is there any way to see the actual p-values?
>
> thank you in advance
> salih
>
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--
James W. MacDonald, M.S.
Biostatistician
Hildebrandt Lab
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