[BioC] Unable to load Rgaphviz

[Martin Morgan]

"anupam sinha" <anupam.contact at gmail.com> writes:

> Hi,
>        My heartiest greetings for Christmas and New Year to all of you. I am
> presently working on the evolutionary dynamics of Metabolic Interaction
> Networks(enzyme centric) for which I have installed R and subsequently
> Rgraphviz. But  whenever I try to load Rgraphviz using the command
> 'library("Rgraphviz")' it gives the following error:
>
> library("Rgraphviz")
> Error in dyn.load(file, ...) :
>   unable to load shared library
> '/home/anupam/R/i686-redhat-linux-gnu-library/2.6/Rgraphviz/libs/Rgraphviz.so':
>   libgvc.so.4: cannot open shared object file: No such file or directory
> Error : .onLoad failed in 'loadNamespace' for 'Rgraphviz'
> Error: package/namespace load failed for 'Rgraphviz'

Likely graphviz (not Rgraphviz) has been installed in such a way that
the graphviz libraries can not be found. A solution might be to set
LD_LIBRARY_PATH or, better, to run ldconfig with appropriate
arguments.

Martin

> Can anyone tell me whats happening???
>
>
> Regards,
> Anupam Sinha
>
> 	[[alternative HTML version deleted]]
>
> _______________________________________________
> Bioconductor mailing list
> Bioconductor at stat.math.ethz.ch
> https://stat.ethz.ch/mailman/listinfo/bioconductor
> Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor

-- 
Martin Morgan
Computational Biology / Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N.
PO Box 19024 Seattle, WA 98109

Location: Arnold Building M2 B169
Phone: (206) 667-2793