[BioC] specifications for exonmap database config file?

Crispin Miller cmiller at picr.man.ac.uk
Tue Dec 9 10:40:19 CET 2008


Hi,
I've just fixed this - in version 2.0.02 (or for the devl version - 2.1.02)
-  it should appear in the repository soon...
cheers,
Crispin


On 09/12/2008 07:31, "Heidi Dvinge" <heidi at ebi.ac.uk> wrote:

> Hi Joseph,
> 
> quick question; do you get the same error message when you specify which
> port to use in your databases.txt file? In your first email you used 3306,
> does that still apply?
> 
> \Heidi
> 
>> Just wanted to add that I noticed I had exonmap 2.0.0, ... so I installed
>> 2.0.01, and am seeing the same error:
>> 
>> 
>>>> xmapConnect()
>>> Select a database to connect to:
>>> 
>>> 1: Human ('homo_sapiens_core_50_36l')
>>> 
>>> Selection: 1
>>> username:***
>>> password:***
>>> Error in mysqlNewConnection(dbDriver(drv), ...) :
>>>   Argument client.flag must be an integer value
>>> 
>> 
>> 
>> --
>> Joseph Fass
>> Bioinformatics Programmer
>> UC Davis Bioinformatics Core
>> joseph.fass -at- gmail.com (professional)
>> 970.227.5928 (c)  ||  530.752.2698 (w)
>> 
> 
> _______________________________________________
> Bioconductor mailing list
> Bioconductor at stat.math.ethz.ch
> https://stat.ethz.ch/mailman/listinfo/bioconductor
> Search the archives:
> http://news.gmane.org/gmane.science.biology.informatics.conductor 
--------------------------------------------------------
This email is confidential and intended solely for the u...{{dropped:12}}



More information about the Bioconductor mailing list