[BioC] specifications for exonmap database config file?
Crispin Miller
cmiller at picr.man.ac.uk
Tue Dec 9 10:40:19 CET 2008
Hi,
I've just fixed this - in version 2.0.02 (or for the devl version - 2.1.02)
- it should appear in the repository soon...
cheers,
Crispin
On 09/12/2008 07:31, "Heidi Dvinge" <heidi at ebi.ac.uk> wrote:
> Hi Joseph,
>
> quick question; do you get the same error message when you specify which
> port to use in your databases.txt file? In your first email you used 3306,
> does that still apply?
>
> \Heidi
>
>> Just wanted to add that I noticed I had exonmap 2.0.0, ... so I installed
>> 2.0.01, and am seeing the same error:
>>
>>
>>>> xmapConnect()
>>> Select a database to connect to:
>>>
>>> 1: Human ('homo_sapiens_core_50_36l')
>>>
>>> Selection: 1
>>> username:***
>>> password:***
>>> Error in mysqlNewConnection(dbDriver(drv), ...) :
>>> Argument client.flag must be an integer value
>>>
>>
>>
>> --
>> Joseph Fass
>> Bioinformatics Programmer
>> UC Davis Bioinformatics Core
>> joseph.fass -at- gmail.com (professional)
>> 970.227.5928 (c) || 530.752.2698 (w)
>>
>
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