[BioC] Problem with GOPkgBuilder from AnnBuilder when trying to create an updated GO data package

[Stefan Goetz]

Hi Everybody!
I'm trying to create an updated GO data package using GOPkgBuilder from 
AnnBuilder but got stucked!
Any advise most appreciated!
Thanks, Stefan

 > GOPkgBuilder("GO", tempdir(), 
"/home/sgoetz/home/data-files/go_200709-termdb.obo-xml", "200709", 
author = c(author = "sgoetz", maintainer = "mymail at mail.es"), FALSE)

results in:

creating main environments...
[1] "environment 24754"
saving TERM
saving BPPARENTS
saving MFPARENTS
saving CCPARENTS
saving BPCHILDREN
saving MFCHILDREN
saving CCCHILDREN
saving OBSOLETE
saving BPOFFSPRING
saving MFOFFSPRING
saving CCOFFSPRING
saving BPANCESTOR
saving MFANCESTOR
saving CCANCESTOR
DONE
[1] "length 24751"
Error in author[["authors"]] : subscript out of bounds

PD: Just in case: I'm using R v. 2.5.1 (all packaged just installed) on 
Ubuntu ...





-- 

--------------------------------------------
Stefan Götz
Bioinformatics Department
Centro de Investigación Príncipe Felipe (CIPF)
C/E.P. Avda. Autopista del Saler, 16-3 (junto Oceanográfico)
46013 Valencia, Spain
Tel: +34 963289680 Ext. 1011
Fax: +34 963289574
E-Mail: sgoetz at cipf.es
http://bioinfo.cipf.es