[BioC] Analysis of two sample gene files in lumi

[Cei Abreu-Goodger]

Hi Yogi,

have you tried reading both files with 'lumiR' and then combining the 
resulting LumiBatch objects with 'combine'?

See help for:
?lumiR
?LumiBatch
?combine

This should work fine as long as none of the samples have duplicated 
names.

Cheers,

Cei

On Mon, 24 Sep 2007, Yogi Sundaravadanam wrote:

> Hi all
>
>
>
> I have got 2 sample gene profile files (18 illumina samples in each) and
> I would like to analyse them together in lumi. Is this possible? I just
> thought I’d copy-paste contents of one file into another, but there
> aren’t sufficient columns in Excel to accommodate this concatenation.
>
>
>
> I was thinking may be I should edit the files to isolate columns that
> are really necessary but I was just wondering if there is a simple way
> to do this, as my knowledge of R is pretty challenged.
>
>
>
>
>
> Cheers
>
> Yogi
>
>
>
> 	[[alternative HTML version deleted]]
>
>


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