[BioC] RMA of CEL files from different chip types

[David Ruau]

Hi,

I would recommend that you take a look at the MergeMaid package.
http://astor.som.jhmi.edu/MergeMaid/mergemaid.pdf
but there is also an older paper on it from Cope et al.
http://www.bepress.com/sagmb/vol3/iss1/art29/

Best,
David
---
David Ruau
Institute for Biomedical Engineering
RWTH Aachen

On Sep 19, 2007, at 11:12 AM, Abhishek Tripathi wrote:

>
>  Hi All,
>
>  I have 5 CEL files from HGU133A and 5 from HGU133plus2.
>  The first chip type has 22283 genes and the other has
>  54675 genes.
>
>  I want to do RMA for all 10 files together taking only
>  22283 common genes from both chip types.
>
>  How can I do it??
>
>  I would be thankful for your help.
>
> Regards,
> Abhishek Tripathi
>
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