[BioC] topTable in limma

Brooke LaFlamme bal44 at cornell.edu
Tue Sep 18 23:40:26 CEST 2007

Sorry, I had one more question! 

If I have more that one contrast in my fit (after running ebayes(fit)), and I use this to produce a table of top genes using topTable(), does the list of genes produced simply correspond to the genes with the highest probability of being significant in one or more contrasts, up to N genes? This is what I assumed to be the case, but I'm not certain. 

Thanks again!

Brooke L.

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