[BioC] segmentation for Affy SNP arrays

[Yu Chuan Tai]

Thanks! Looks like aroma.affymetrix uses GLAD model for segmentation......
Is there any other software available?

Yu Chuan

On Tue, 18 Sep 2007, Kasper Daniel Hansen wrote:

> You can check out aroma.affymetrix from www.braju.com/R
>
> Kasper
>
> On Sep 18, 2007, at 12:51 PM, Yu Chuan Tai wrote:
>
>> Hi List,
>> 
>> Just want to know if there is any software which does segmentation
>> on copy number estimates from Affy SNP arrays? It looks like GLAD, DNAcopy
>> and snapCGH are only for array CGH......
>> 
>> Thanks!
>> Yu Chuan
>> 
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