[BioC] Having two parallel versions of BioC
Sean Davis
sdavis2 at mail.nih.gov
Thu Sep 13 14:21:52 CEST 2007
arne.mueller at novartis.com wrote:
> Hello,
>
> is it possible to have two versions of BioC (Release and Devel) in the
> same R system - maybe using the "lib" argument in bgetBioC? I'd like to
> install R-2.5.1 and to provide the BioC stable release as well as devel.
> Then, is there a way for the user to choose at startup of R which version
> of bioC to use?
Bioc-devel is only meant to run on R-devel. So, I would suggest
installing two versions of R. On windows, I think these two versions
can coexist and the user can choose from the Program menu (but I could
be wrong on this). On linux/unix, you can simply create a symbolic link
called Rdev (or something like that) to the executable for R-devel and
the one for R to the executable for R-2.5.1, for example. Then, when a
user starts up her chosen version of R, the appropriate bioc package
versions will be in use.
Sean
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