[BioC] probe summarization

[James W. MacDonald]

Hi Bogdan,

Bogdan Tanasa wrote:
> Hi all,
> 
> I would like to ask for an information: I carry the array analysis for a
> large dataset (40 samples * 2 replicates);
> the arrays are Affy U133A, and I use GCRMA and invariant set normalization.
> Please could you  let me know
> the way I could do the probe summarization for these arrays. Thanks and best

GCRMA _is_ a method to do probe summarization. Maybe you are asking a 
different question?

Best,

Jim


> regards,
> 
> Bogdan
> 
> 	[[alternative HTML version deleted]]
> 
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-- 
James W. MacDonald
University of Michigan
Affymetrix and cDNA Microarray Core
1500 E Medical Center Drive
Ann Arbor MI 48109
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