[BioC] BACKGROUND CORRECTION AND NORMALIZATION FOR VERY SMALL CUSTOMIZED ARRAYS

Bandyopadhyay, Somnath (Som) somnath.bandyopadhyay at pnl.gov
Tue Oct 16 03:02:52 CEST 2007


Hi,
I am trying to analyze gene expression data from some customized single channel arrays having only 40 genes including control probes. I have enough replicates to work with. Can anybody suggest a method for background correction and normalization for these kind of arrays? I have around 8 slides.Even links to references would be highly appreciated.
Thanks,
Som.



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