[BioC] reading many affy U133 Plus_2.0

darteta001 at ikasle.ehu.es darteta001 at ikasle.ehu.es
Fri Oct 5 13:57:53 CEST 2007


Dear list,

In order to normalise my data using fitPLM(), I need to create an 
affybatch using ReadAffy(). This time I think justRMA() is not an 
option I can use. 

Has anyone been successful at reading in a large group of Plus chips 
(say 100) using ReadAffy() and the normalise them using fitPLM() on 
a "normal" PC on Windows? What amount of memory is needed for it? 
Any examples on how many chips you might have loaded with memory 
details would be very appreciated.

Regards,

David



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