[BioC] AnnBuilder: problem with kegg url?

[Matthias E. Futschik]

hi all,
I try to use ABPkgBuilder (session info below)
with following code (partly from the vignette)

#####
library(AnnBuilder)
read.table(file.path(.path.package("AnnBuilder"), "data", "thgu95a"),
           sep = "\t", header = FALSE, as.is = TRUE)
myBase <- file.path(.path.package("AnnBuilder"), "data", "thgu95a")
myBaseType <- "gb"
myDir <- tempdir()
ABPkgBuilder(baseName = myBase, baseMapType = myBaseType,
 pkgName = "myPkg", pkgPath = myDir,
organism = "Homo sapiens", version = "1.1.0", author = list(authors =
"myname",
maintainer = "myname at myemail.com"), fromWeb = TRUE)
#####

The last command however failed:

Error in parseKEGGGenome(url = kegggenomeUrl) :
        Faild to obtain KEGG organism code

Checking for the url gives

 getOption("AnnBuilderSourceUrls")$KEGGGENOME
[1] "ftp://ftp.genome.ad.jp/pub/kegg/tarfiles/genome"

However, this directory does not exist anymore!
Which should be the correct one? And how do I fix this
within the ABPkgBuilder command?

thanks,
Matthias.

ps: I could save my troubles if there is an annotation package for
the complete set of human entrezids (which includes go + kegg + pfam) -
is there?

> sessionInfo()
R version 2.4.1 (2006-12-18)
i386-pc-mingw32

locale:
LC_COLLATE=German_Germany.1252;LC_CTYPE=German_Germany.1252;LC_MONETARY=German_Germany.1252;LC_NUMERIC=C;LC_TIME=German_Germany.1252

attached base packages:
[1] "tools"     "stats"     "graphics"  "grDevices" "utils"     "datasets"
 "methods"   "base"

other attached packages:
        GO AnnBuilder    RSQLite        DBI   annotate        XML    Biobase
  "1.14.1"   "1.12.0"    "0.5-4"    "0.2-3"   "1.12.1"    "1.6-0"   "1.12.2"
>







***************************************************
Matthias E. Futschik
Institute for Theoretical Biology
Charite - Medical School
Humboldt-University
Invalidenstrasse 43
10115 Berlin
Germany

email: m.futschik at biologie.hu-berlin.de
phone: + 49-30-2093 9106
fax:   + 49-30-2093 8801
URL:  
http://itb.biologie.hu-berlin.de/~futschik	***************************************************