[BioC] Workflow question in lumi
Longsi Ran
longsiran1126 at hotmail.com
Thu May 31 15:29:53 CEST 2007
Hi,
I noticed that your recommended Illumina workflow in lumi is: 1. VST
transformation (including Logarithm). 2, RSN or Quantile normalization. As
most of normalization work on linear expression values, is there a
particular logic to establish normalizing only logged data? In other words,
Logarithm first, then Normalization, or vice versa?
I am looking forward to hearing from you soon.
Thanks!
Longsi Ran M.D
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