[BioC] how to find the children identifiers of a specific KEGG identifier in R??

Francois Pepin fpepin at cs.mcgill.ca
Wed May 16 23:17:28 CEST 2007


Hi Hua,

KEGG pathways are not organized hierarchically, they don't have any
children or ancestors.

Or are you talking about getting the member genes of a given pathway?

Francois

On Wed, 2007-05-16 at 15:27 -0500, Li, Hua wrote:
> Dear list members:
>    Once I know a KEGG pathway identifier, how can I check all its
> direct children identifiers? you know, I could use GOMFCHILDREN or
> GOCCCHILDREN to check the children terms for a specific GO term, but I
> don't know how to do it in the same way for KEGG in R?
>    Many Thanks!!
> Hua
> 
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