[BioC] GOstats, geneCounts and gene universe filtering...
Seth Falcon
sfalcon at fhcrc.org
Fri May 11 18:53:30 CEST 2007
Jesper Ryge <Jesper.Ryge at ki.se> writes:
> thanks for the fast answer:-) its nice to know im battling my way in
> the right direction...
I believe I have found and fixed the bug causing the discrepancy in
counts for conditional hyperGTests. The problem was that one of the
functions was consulting the gene universe, not the _conditional_ gene
universe.
The new versions for the release are:
Category 2.2.3
GOstats 2.2.2
They should be available in the repository by Monday.
+ seth
--
Seth Falcon | Computational Biology | Fred Hutchinson Cancer Research Center
http://bioconductor.org
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