[BioC] hyperGTest

[Seth Falcon]

"Tony Chiang" <tchiang at fhcrc.org> writes:

> Hi Naomi,
>
> Can you try this:
>
> source("http://www.bioconductor.org/biocLite.R")biocLite("GOstats")

The formatting got messed up, so just to be clear you want:

source("http://www.bioconductor.org/biocLite.R")
biocLite("GOstats")

> I have forgotten if GOstats if apart of the default packages that biocLite
> automatically downloads, but from what you have written it does not appear
> to be. Therefore, you actually have to tell biocLite to get this particular
> package...and this should install all its dependencies as well.

It is not one of the defaults.  And in general, if you want a
particular package, you should ask biocLite for it directly.

+ seth

-- 
Seth Falcon | Computational Biology | Fred Hutchinson Cancer Research Center
http://bioconductor.org