[BioC] Error installing EBImage on Suse 10.1

Wolfgang Huber huber at ebi.ac.uk
Wed Jun 20 12:44:54 CEST 2007


Dear Mark,

Oleg is the expert who will probably know the answer, but I could 
imagine that seeing the full output that you get after biocLite would be 
helpful for this, esp. your results from 'configure'.

   Best wishes
   Wolfgang

  Dunning ha scritto:
> Hi,
> 
> I am trying to install EBImage on my 64-bit Linux machine, but am
> running into problems. I am using the command:
> 
> biocLite("EBImage", type="source")
> 
> Which seems to get quite far (it finds that I have ImageMagick 6.2.5)
> but it later fails with the following error:
> 
> 
> collect2: ld returned 1 exit status
> make: *** [EBImage.so] Error 1
> chmod: cannot access
> `/home/md392/R/x86_64-unknown-linux-gnu-library/2.5/EBImage/libs/*': No
> such file or directory
> ERROR: compilation failed for package 'EBImage'
> ** Removing '/home/md392/R/x86_64-unknown-linux-gnu-library/2.5/EBImage'
> 
> 
> Could anyone advise me on what the problem might be? I am always able to
> build packages in this way without any error.
> 
> Thanks in advance for any help,
> 
> Regards,
> 
> Mark
> 
> 
>> sessionInfo()
> R version 2.5.0 (2007-04-23) 
> x86_64-unknown-linux-gnu 
> 
> locale:
> LC_CTYPE=en_GB.UTF-8;LC_NUMERIC=C;LC_TIME=en_GB.UTF-8;LC_COLLATE=en_GB.UTF-8;LC_MONETARY=en_GB.UTF-8;LC_MESSAGES=en_GB.UTF-8;LC_PAPER=en_GB.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_GB.UTF-8;LC_IDENTIFICATION=C
> 
> attached base packages:
> [1] "stats"     "graphics"  "grDevices" "utils"     "datasets"
> "methods"  
> [7] "base"
> 
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-- 

Best wishes
   Wolfgang

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Wolfgang Huber  EBI/EMBL  Cambridge UK  http://www.ebi.ac.uk/huber



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