[BioC] Specifying wells in normalization for cellHTS2
Steve Taylor
staylor at molbiol.ox.ac.uk
Thu Dec 6 14:10:14 CET 2007
Hi,
I would like to specify normalization based on certain negative control wells using the package cellHTS2. I am trying:
xn<-normalizePlates(x,scale="multiplicative",log=FALSE,method="negatives",varianceAdjust="none",negControls=c("B12","C01","C12","D01","D12","E01","F01"))
but get:
Error in checkControls(y = negControls, len = nrChannel, name = "negControls") :
'negControls' should be a vector of regular expressions with length 1
What's the best way to do this?
Thanks for any help,
Steve
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