[BioC] normalize AffyBatch object by control spots?
drnevich at uiuc.edu
Wed Sep 27 20:56:27 CEST 2006
Does anyone know of an existing function in any package to normalize an
AffyBatch object using a set of control probesets only? I've looked through
the functions in the affy package and searched the archives, but couldn't
find anything. There is an option similar to what I want in the
normalizeWithinArrays(method="control") function in limma, but I wanted to
find out if I had missed something before trying to write my own function.
Jenny Drnevich, Ph.D.
Functional Genomics Bioinformatics Specialist
W.M. Keck Center for Comparative and Functional Genomics
Roy J. Carver Biotechnology Center
University of Illinois, Urbana-Champaign
1201 W. Gregory Dr.
Urbana, IL 61801
e-mail: drnevich at uiuc.edu
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