[BioC] having a problem loading Rgraphviz with Intel Mac
Seth Falcon
sfalcon at fhcrc.org
Tue Sep 26 19:20:15 CEST 2006
Hi Jen,
"Jen Buhay" <jenbuhay at gmail.com> writes:
> Hi All -
> I've downloaded Graphviz 2.8 (and graphviz 2.9 intel)
So which version do you have? How and where did you install it?
> intel Macs (I have OSX 10.4.7)
And an intel mac, yes?
> /usr/local/lib/graphviz). Here's the error message I get when I try
> to load Rgraphviz:
How did you install Rgraphviz? For that matter, how did you install
R? It looks like you are using an R 2.3.x from the error messages,
but did you build from source, install the binary from CRAN, or ???
With a few more details, we may be able to provide some guidance.
Basically, if you are using the CRAN binary version of R.app, then you
should follow these instructions:
1. Install the _graphviz_ binary from http://r.research.att.com/.
[First, remove any other graphviz installs.]
2. Install the _binary_ version of the BioC Rgraphviz package:
source("http://bioconductor.org/biocLite.R")
biocLite("Rgraphviz")
+ seth
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