[BioC] limma help - choosing an approach

Gordon Smyth smyth at wehi.EDU.AU
Fri Sep 15 06:09:13 CEST 2006

Dear John,

I wrote the warning in the ?lmscFit documentation about it being 
somewhat experimental more than two and a half years ago, when the 
function were first introduced into the limma package. I've done much 
more testing since then, and the function has stood the test of time, 
so I'll remove the warning.

Best wishes

>[BioC] limma help - choosing an approach
>john seers (IFR) john.seers at bbsrc.ac.uk
>Thu Sep 14 12:19:39 CEST 2006
>Hello Naomi (and anyone else)
>Thanks again for your help. It has  been extremely helpful. Almost there
>I think, though I am still just doing it on autopilot and not quite sure
>how meaningful this is. I am slightly worried by the limma documentation
>which describes the single channel analysis as "experimental" so
>combined with my lack of understanding makes me feel quite uncertain.
>Anyway I can run it now and pull out lists of genes - though what they
>mean I am not sure yet.

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