[BioC] Scripts to handle array CGH data files from NimbleGen

Todd Richmond todd at nimblegen.com
Fri Sep 1 20:27:35 CEST 2006


Hi Romain,

I have some preliminary code which reads in NimbleGen CGH ratio files, 
passes it to tilingArray, and produces plots and tables identical to our 
deliverables. It still needs a bit more work and testing but I should 
have that ready sometime next week. I'll send you an email when it's ready.

Todd


rdesprat wrote:
> Dear Todd,
> 
>  
> 
> I am trying to use Tilling array for my CGH data from nimblegen but I don'
> succeed. Would you have something written down about how to do it ?
> 
>  
> 
>  
> 
> Romain Desprat
> 
>  
> 
> PhD student
> 
> Albert Einstein Medical School (NY)
> 
> rdesprat at aecom.yu.edu
> 
> 7184303119
> 
> 
> 	[[alternative HTML version deleted]]
> 
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> 


-- 
Todd Richmond, PhD
Manager of Research Informatics
NimbleGen Systems, Inc
Madison, WI 53719
1-608-218-7600



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