[BioC] From GEO to aCGH and snapCGH

Sean Davis sdavis2 at mail.nih.gov
Thu Nov 23 21:27:39 CET 2006


João Fadista wrote:
> Hi,
>  
> Does anyone knows how can I convert the format from a GEO (Gene Expression Omnibus) CGH dataset to a format suitable to be analysed by the snapCGH and aCGH packages?
>   
Joao,

What is the GEO accession number?  Does the platform information include 
a chromosome and location for the probes?  What have you tried and what 
hasn't worked?

Sean



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