[BioC] help with KEGG or KEGGSOAP
Nianhua Li
nli at fhcrc.org
Tue Nov 21 21:02:22 CET 2006
Dear Alan,
I have updated KEGGSOAP (1.9.1) in bioconductor 2.0 repository so that it is
compatible with KEGG API version 6.0. It should work in R 2.4 (with either SSOAP
0.3 or 0.4) as well.
I add functions:
* search.compounds.by.name
* search.glycans.by.name
* search.compounds.by.mass
* search.glycans.by.mass
* search.compounds.by.composition
* search.glycans.by.composition
* search.compounds.by.subcomp
* search.glycans.by.kcam
* bget (useful for generating queries for search.compounds.by.subcomp etc)
KEGG API changelog: http://www.genome.jp/kegg/soap/changelog.html
KEGG API reference: http://www.genome.jp/kegg/docs/keggapi_manual.html
PS: I will send you windows binary offline
cheers
nianhua
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